PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00013875-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 393aa    MW: 44821.8 Da    PI: 9.8551
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00013875-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.41.9e-25241431114
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tksgyWkat 86 
                         lp G+rFhPtdeelv +yLk+kv + +l++ +vi+e+d+++++Pw Lp  +   +++ yfFs+r+k+ +t   +n       t+sgyWk  
  WALNUT_00013875-RA  24 LPIGYRFHPTDEELVFHYLKRKVFAIPLPV-SVIPEFDVFQTDPWGLPGDL---KEKRYFFSTRSKRISTALDNNYCkraagTTSGYWKPV 110
                         699***************************.99***************554...4578********999755444322335588******* PP

                 NAM  87 gkdkevlskkgel..vglkkt...Lvfykgrap 114
                         gk+k++l++++++  + + +    Lvf ++++p
  WALNUT_00013875-RA 111 GKSKQILASESNVsmMVMEDWvvyLVFQRKKRP 143
                         *******98554433444444111444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-2811135IPR003441NAC domain
PROSITE profilePS5100527.21224175IPR003441NAC domain
PfamPF023653.5E-1325126IPR003441NAC domain
PfamPF134566.4E-13288385No hitNo description
CDDcd062227.19E-12302383No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MQEKPKQYCA MINNINNGSG ITVLPIGYRF HPTDEELVFH YLKRKVFAIP LPVSVIPEFD  60
VFQTDPWGLP GDLKEKRYFF STRSKRISTA LDNNYCKRAA GTTSGYWKPV GKSKQILASE  120
SNVSMMVMED WVVYLVFQRK KRPEKQGVMI SQPSNSKKIR RLEVRPTTMN YMGEVSSDLG  180
PDPQPSSSCK SEITEVSSII GLDQEETRKV RNKEPKGRYL GTPRLGKRNP RTWRALQSLD  240
GFRSEAIRSK EANSSGGSLV STIKQWMMSK IMLWDWGLSS ETVKGIEVVA AYSEPQRMNA  300
IAVLVEAIAL RRTIEVCKEM GFNKVVFEGD ALIIINAVTD NVECWTWYGQ VVEDVKRSLK  360
EMLHWEIQFV QRKGNIIAHK LTKFALNLEN FTC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-162411615105Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF70434139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-32NAC domain containing protein 83